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U S M L E®

STEP 1

Lecture Notes 2018

Biochemistry and Medical Genetics

USMLE® is a joint program of the Federation of State Medical Boards (FSMB) and the National Board of Medical Examiners (NBME), neither of which sponsors or endorses this product.

This publication is designed to provide accurate information in regard to the subject matter covered as of its publication date, with the understanding that knowledge and best practice constantly evolve. The publisher is not engaged in rendering medical, legal, accounting, or other professional service.

If medical or legal advice or other expert assistance is required, the services of a competent professional should be sought. This publication is not intended for use in clinical practice or the delivery of medical care. To the fullest extent of the law, neither the Publisher nor the Editors assume any liability for any injury and/or damage to persons or property arising out of or related to any use of the material contained in this book.

© 2018 by Kaplan, Inc.

Published by Kaplan Medical, a division of Kaplan, Inc. 750 Third Avenue

New York, NY 10017

10 9 8 7 6 5 4 3 2 1

Course ISBN-13: 978-1-5062-2827-3

All rights reserved. The text of this publication, or any part thereof, may not be reproduced in any manner whatsoever without written permission from the publisher. This item comes as a set and should not be broken out and sold separately.

Retail ISBN-13: 978-1-5062-3954-5

Kaplan Publishing print books are available at special quantity discounts to use for sales promotions, employee premiums, or educational purposes. For more information or to purchase books, please call the Simon & Schuster special sales department at 866-506-1949.

Editor

Sam Turco, PhD

Professor, Department of Biochemistry

University of Kentucky College of Medicine

Lexington, KY

Contributors

Roger Lane, PhD

Professor, Department of Biochemistry

University of South Alabama College of Medicine

Mobile, AL

Ryan M. Harden, MD, MS

Physician, Family Medicine

Gateway Family Health Clinic, Ltd

Sandstone, MN

Assistant Professor, Department of Family Medicine and Community Health

University of Minnesota Medical School, Duluth Campus

Duluth, MN

We want to hear what you think. What do you like or not like about the Notes? Please email us at medfeedback@kaplan.com.

Table of Contents

Part I: Biochemistry

Chapter 1: Nucleic Acid Structure and Organization 3

Chapter 2: DNA Replication and Repair 17

Chapter 3: Transcription and RNA Processing 33

Chapter 4: The Genetic Code, Mutations, and Translation 49

Chapter 5: Regulation of Eukaryotic Gene Expression 75

Chapter 6: Genetic Strategies in Therapeutics 87

Chapter 7: Techniques of Genetic Analysis 103

Chapter 8: Amino Acids, Proteins, and Enzymes 119

Chapter 9: Hormones 135

Chapter 10: Vitamins 149

Chapter 11: Energy Metabolism 163

Chapter 12: Glycolysis and Pyruvate Dehydrogenase 175

Chapter 13: Citric Acid Cycle and Oxidative Phosphorylation 193

Chapter 14: Glycogen, Gluconeogenesis, and the Hexose

Monophosphate Shunt 205

Chapter 15: Lipid Synthesis and Storage 223

Chapter 16: Lipid Mobilization and Catabolism 243

Chapter 17: Amino Acid Metabolism 265

Chapter 18: Purine and Pyrimidine Metabolism 289

v

Part II: Medical Genetics

Chapter 1: Single-Gene Disorders 303

Chapter 2: Population Genetics 333

Chapter 3: Cytogenetics 347

Chapter 4: Genetics of Common Diseases 371

Chapter 5: Recombination Frequency 379

Chapter 6: Genetic Diagnosis 391

Index 407

Additional resources available at

www.kaptest.com/usmlebookresources

vi

PART I

Biochemistry

Nucleic Acid Structure

and Organization

Learning Objectives

Explain information related to nucleotide structure and nomenclature

Use knowledge of organization of DNA versus RNA

Understand general features of a chromosome

CENTRAL DOGMA OF MOLECULAR BIOLOGY

An organism must be able to store and preserve its genetic information, pass that information along to future generations, and express that information as it carries out all the processes of life. The major steps involved in handling genetic information are illustrated by the central dogma of molecular biology.

Replication

Transcription Translation

DNA RNA Protein

Reverse transcription

Figure I-1-1. Central Dogma of Molecular Biology

Genetic information is stored in the base sequence of DNA molecules. Ultimately, during the process of gene expression, this information is used to synthesize all the proteins made by an organism.

Classically, a gene is a unit of the DNA that encodes a particular protein or RNA molecule. Although this definition is now complicated by our increased appreciation of the ways in which genes may be expressed, it is still useful as a working definition.

Gene Expression and DNA Replication

High-Yield

 

Gene expression and DNA replication are compared below. Transcription, the first stage in gene expression, involves transfer of information found in a dou- ble-stranded DNA molecule to the base sequence of a single-stranded RNA molecule. If the RNA molecule is a messenger RNA, then the process known as translation converts the information in the RNA base sequence to the amino acid sequence of a protein.

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