Garrett R.H., Grisham C.M. - Biochemistry (1999)(2nd ed.)(en)
.pdf22.9 ● The Calvin–Benson Cycle |
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The set of reactions that transforms 3-phosphoglycerate into hexose is named the Calvin–Benson cycle (often referred to simply as the Calvin cycle) for its discoverers. The reaction series is indeed cyclic because not only must carbohydrate appear as an end product, but the 5-carbon acceptor, RuBP, must be regenerated to provide for continual CO2 fixation. Balanced equations that schematically represent this situation are
6(1) 6(5) 88n |
12(3) |
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12(3) |
88n |
1(6) 6(5) |
Net : 6(1) |
88n |
1(6) |
Each number in parentheses represents the number of carbon atoms in a compound, and the number preceding the parentheses indicates the stoichiometry of the reaction. Thus, 6(1), or 6 CO2, condense with 6(5) or 6 RuBP to give 12 3-phosphoglycerates. These 12(3)s are then rearranged in the Calvin cycle to form one hexose, 1(6), and regenerate the six 5-carbon (RuBP) acceptors.
The Enzymes of the Calvin Cycle
The Calvin cycle enzymes serve three important ends:
1.They constitute the predominant CO2 fixation pathway in nature.
2.They accomplish the reduction of 3-phosphoglycerate, the primary product of CO2 fixation, to glyceraldehyde-3-phosphate so that carbohydrate synthesis becomes feasible.
3.They catalyze reactions that transform 3-carbon compounds into 4-, 5-, 6-, and 7-carbon compounds.
Most of the enzymes mediating the reactions of the Calvin cycle also participate in either glycolysis (Chapter 19) or the pentose phosphate pathway (Chapter 23). The aim of the Calvin scheme is to account for hexose formation from 3-phosphoglycerate. In the course of this metabolic sequence, the NADPH and ATP produced in the light reactions are consumed, as indicated earlier in Equation (22.3).
The Calvin cycle of reactions starts with ribulose bisphosphate carboxylase catalyzing formation of 3-phosphoglycerate from CO2 and RuBP and concludes with ribulose-5-phosphate kinase (also called phosphoribulose kinase), which forms RuBP (Figure 22.25 and Table 22.1). The carbon balance is given at the right side of the table. Several features of the reactions in Table 22.1 merit discussion. Note that the 18 equivalents of ATP consumed in hexose formation are expended in reactions 2 and 15: 12 to form 12 equivalents of 1,3-bisphospho- glycerate from 3-phosphoglycerate by a reversal of the normal glycolytic reaction catalyzed by 3-phosphoglycerate kinase, and six to phosphorylate Ru-5-P to regenerate 6 RuBP. All 12 NADPH equivalents are used in reaction 3. Plants possess an NADPH-specific glyceraldehyde-3-phosphate dehydrogenase, which contrasts with its glycolytic counterpart in its specificity for NADP over NAD and in the direction in which the reaction normally proceeds.
Balancing the Calvin Cycle Reactions To
Account for Net Hexose Synthesis
When carbon rearrangements are balanced to account for net hexose synthesis, five of the glyceraldehyde-3-phosphate molecules are converted to dihydroxyacetone phosphate (DHAP). Three of these DHAPs then condense with three glyceraldehyde-3-P via the aldolase reaction to yield 3 hexoses in the form
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6 ADP |
6 ATP Phosphoribulose kinase |
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H2 |
COPO23– |
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H2 |
COPO23– |
12 ATP 12 ADP |
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12 |
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12 NADP+ + 12 P |
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6 CO2 |
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2– |
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NADPH |
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C |
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HOCH |
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O |
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OPO3 |
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3 |
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COO– |
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C |
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CHO |
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HCOH |
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6 |
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12 |
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12 |
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Ribulose |
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+ |
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Phospho- |
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HCOH |
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Glyceraldehyde- |
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HCOH |
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HCOH |
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bisphos- |
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COO– |
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COPO32– |
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COPO32– |
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2– |
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phate |
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glycerate |
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3-phosphate |
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carboxylase |
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kinase |
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dehydrogenase |
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H2COPO3 |
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HCOH |
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1,3-Bisphospho- |
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Glyceraldehyde- |
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Ribulose-1,5-bis- |
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glycerate |
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3-phosphate |
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6 |
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H2COPO23– |
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phosphate |
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(BPG) |
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(G3P) |
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(RuBP) |
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Two 3-Phospho- |
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glycerates |
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(3PG) |
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4 5 |
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H2 |
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Triose phosphate isomerase |
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H2 |
COPO23– |
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HCOH |
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HCOH |
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H2COH |
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HCOH |
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H |
COPO2– |
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Dihydroxyacetone |
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H2COPO23– |
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3 phosphate (DHAP) |
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Ribulose- |
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5-phosphate |
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Erythrose-4- |
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2 |
|
phosphate (E4P) |
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Aldolase |
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(Ru5P) |
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3 |
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Aldolase |
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2 |
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H2COPO32– |
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13 Phosphopentose |
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10 |
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Glucose |
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C |
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O |
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epimerase |
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2– |
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2 |
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H2 |
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COPO3 |
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4 |
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8 Glucose-6- |
4 |
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HOCH |
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P |
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|||||||||||||||||||||||||||||||||||||
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C |
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O |
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phosphatase |
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Phospho- 14 |
|||||||||||||||||||
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|||||||||||||||||||||||
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HCOH |
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HOCH |
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CHO |
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pentose |
||||||||||||
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HCOH |
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isomerase |
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HCOH |
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HCOH |
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|||||||||||
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H2COPO32– |
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||||||||||
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HCOH |
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HOCH |
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||||||||
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Fructose-1,6- |
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|||||||||||||||||||||||
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||||||||||||
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HCOH |
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|
bisphosphate (FBP) |
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|||||||||||||||||||||
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HCOH |
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||||||||||||||||||||||||||||
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6 |
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|||
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||||||
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|
H2COPO23– |
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||||||||||||||||||||
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|
Fructose |
|
|
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|
HCOH |
|
|
H2 |
|
COH |
|
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|
CHO |
|
||||||||||||||||||||||||||||||||
|
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|
P |
3 |
|
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|
|
bisphosphatase |
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||||||||||||||
|
Sedoheptulose-1,7 |
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|||||||||||||||||||||||||||||
|
bisphosphate (SBP) |
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|
H2COPO32– |
|
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|
C |
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|
O |
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|
HCOH |
|
||||||||||||||||||||||||||||
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||||||||||||||||||||||||||||||||
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|
Glucose-6- |
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||||||
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||||||||
11 |
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2 |
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HOCH |
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||||||||||||||||||||||
|
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H2 |
|
COH |
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|
phosphate |
|
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|
HCOH |
|
|||||||||||||||||||||||||||||||||||||
|
P 2 |
Sedoheptulose |
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|
(G6P) |
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|||||||||||||||||||
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C |
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O |
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HCOH |
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HCOH |
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|||||||||||||||||||||||||||||
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7 |
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H2 |
|
COPO32– |
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|
H2 |
|
COPO32– |
|
||||||||||
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||||||||||||||||||||||
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|||||||||||||||
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H2 |
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COH |
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HOCH |
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|||||||||||||||||||||||||||||||||||
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Xylulose-5- |
|
|
Ribose-5- |
|
||||||||||||||||||||||
|
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C |
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|
O |
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HCOH |
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||||||||||||||||||||||||||||||
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|
Phospho- |
|
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|
|
1 |
|
phosphate (Xu5P) |
phosphate (R5P) |
|||||||||||||||||||||||||||||||||||
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|||||||||||||||||||||||
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|
HOCH |
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|
HCOH |
|
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|
glucoisomerase |
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||||||||||||||||||||
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Fructose-6- |
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Transketolase |
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Transketolase |
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734
738 Chapter 22 ● Photosynthesis
productivity because it leads to loss of RuBP, the essential CO2 acceptor. The Km for O2 in this oxygenase reaction is about 200 M. Given the relative abundance of CO2 and O2 in the atmosphere and their relative Km values in these rubisco-mediated reactions, the ratio of carboxylase to oxygenase activity in vivo is about 3 or 4 to 1.
The products of ribulose bisphosphate oxygenase activity are 3-phospho- glycerate and phosphoglycolate. Dephosphorylation and oxidation convert phosphoglycolate to glyoxylate, the -keto acid of glycine (Figure 22.29b). Transamination yields glycine. Other fates of phosphoglycolate are also possible, including oxidation to CO2, with the released energy being dissipated as heat. Obviously, agricultural productivity is dramatically lowered by this phenomenon, which, because it is a light-related uptake of O2 and release of CO2, is termed photorespiration. As we shall see, certain plants, particularly tropical grasses, have evolved means to circumvent photorespiration. These plants are more efficient users of light for carbohydrate synthesis.
22.12 ● The C-4 Pathway of CO2 Fixation
Tropical grasses are less susceptible to the effects of photorespiration, as noted earlier. Studies employing 14CO2 as a tracer indicated that the first organic intermediate labeled in these plants was not a three-carbon compound but a four-carbon compound. Hatch and Slack, two Australian biochemists, first discovered this C-4 product of CO2 fixation, and the C-4 pathway of CO2 incorporation is named the Hatch–Slack pathway after them. The C-4 pathway is not an alternative to the Calvin cycle series of reactions or even a net CO2 fixation scheme. Instead, it functions as a CO2 delivery system, carrying carbon dioxide from the relatively oxygen-rich surface of the leaf to interior cells where oxygen is lower in concentration and hence less effective in competing with CO2 in the rubisco reaction. Thus, the C-4 pathway is a means of avoiding photorespiration by sheltering the rubisco reaction in a cellular compartment away from high [O2]. The C-4 compounds serving as CO2 transporters are malate or aspartate.
Compartmentation of these reactions to prevent photorespiration involves the interaction of two cell types, mesophyll cells and bundle sheath cells. The mesophyll cells take up CO2 at the leaf surface, where O2 is abundant, and use it to carboxylate phosphoenolpyruvate to yield OAA in a reaction catalyzed by PEP carboxylase (Figure 22.30). This four-carbon dicarboxylic acid is then either reduced to malate by an NADPH-specific malate dehydrogenase or transaminated to give aspartate in the mesophyll cells.4 The 4-C CO2 carrier (malate or aspartate) then is transported to the bundle sheath cells, where it is decarboxylated to yield CO2 and a 3-C product. The CO2 is then fixed into organic carbon by the Calvin cycle localized within the bundle sheath cells, and the 3-C product is returned to the mesophyll cells, where it is reconverted to PEP in preparation to accept another CO2 (Figure 22.30). Plants that use the C-4 pathway are termed C4 plants, in contrast to those plants with the conventional pathway of CO2 uptake (C3 plants).
4A number of different biochemical subtypes of C4 plants are known. They differ in whether OAA or malate is the CO2 carrier to the bundle sheath cell and in the nature of the reaction by which the CO2 carrier is decarboxylated to regenerate a 3-C product. In all cases, the 3-C product is returned to the mesophyll cell and reconverted to PEP.