- •Foreword
- •Contents
- •Contributor Current and Past Positions: Association for Academic Surgery
- •Contributors
- •Academic Surgeons as Bridge-Tenders
- •Types of Surgical Research
- •Going Forward
- •Selected Readings
- •Introduction
- •Preparation Phase
- •Assistant Professor
- •Job Search
- •The First Three Years
- •Career Development Awards (CDAs)
- •Contemplating a Mid-Career Move?
- •Approaching Promotion
- •Associate Professor and Transition to Full Professor
- •Conclusion
- •Selected Readings
- •Introduction
- •Reviewing the Literature
- •Developing a Hypothesis
- •Study Design
- •Selected Readings
- •Introduction
- •The Dual Loyalties of the Surgeon-Scientist
- •Human Subjects Research
- •Informed Consent
- •Surgical Innovation and Surgical Research
- •Conflict of Interest
- •Publication and Authorship
- •Conclusion
- •References
- •Sources of Error in Medical Research
- •Study Design
- •Inferential Statistics
- •Types of Variables
- •Measures of Central Tendency and Spread
- •Measures of Spread
- •Comparison of Numeric Variables
- •Comparison of Categorical Values
- •Outcomes/Health Services Research
- •Steps in Outcomes Research
- •The Basics of Advanced Statistical Analysis
- •Multivariate Analysis
- •Time-to-Event Analysis
- •Advanced Methods for Controlling for Selection Bias
- •Propensity Score Analysis
- •Instrumental Variable (IV) Analysis
- •Summary
- •Selected Readings
- •Transgenic Models
- •Xenograft Models
- •Noncancer Models
- •Alternative Vertebrate Models
- •Selected Readings
- •Overview
- •Intellectual Disciplines and Research Tools
- •Comparative Effectiveness Research
- •Patient-Centered Outcomes Research
- •Data Synthesis
- •Overview
- •Intellectual Disciplines and Research Tools
- •Disparities
- •Quality Measurement
- •Implementation Science
- •Patient Safety
- •Optimizing the Health Care Delivery System
- •Overview
- •Intellectual Disciplines and Research Tools
- •Policy Evaluation
- •Surgical Workforce
- •Conclusion
- •References
- •Introduction
- •What Is Evidence-Based Medicine?
- •Evidence-Based Educational Research
- •Forums for Surgical Education Research
- •Conducting Surgical Education Research
- •Developing Good Research Questions
- •Beginning the Study Design Process
- •Developing a Research Team
- •Pilot Testing
- •Demonstrating Reliability and Validity
- •Developing a Study Design
- •Data Collection and Analysis
- •Surveys
- •Ethics
- •Funding
- •Conclusions
- •Selected Readings
- •Genomics
- •Gene-Expression Profiling
- •Proteomics
- •Metabolomics
- •Conclusions
- •References
- •Selected Readings
- •Introduction
- •Why Write
- •Getting Started
- •Where and When to Write
- •Choosing the Journal
- •Instructions to Authors
- •Writing
- •Manuscript Writing Order
- •Figures and Tables
- •Methods
- •Results
- •Figure Legends
- •Introduction
- •Discussion
- •Acknowledgments
- •Abstract
- •Title
- •Authorship
- •Revising Before Submission
- •Responding to Reviewer Comments
- •References
- •Selected Readings
- •Introduction
- •Origins of the Term
- •Modern Definition and Primer
- •Transition from Mentee to Colleague
- •Mentoring Risks
- •Conclusion
- •References
- •Selected Readings
- •The Career Development Plan
- •Choosing the Mentor
- •Writing the Career Development Plan
- •The Candidate
- •Research Plan
- •Final Finishing Points About the Research Plan
- •Summary
- •References
- •Introduction
- •Decisions, Decisions!
- •Mission Impossible: Defining a Laboratory Mission or Vision
- •Project Planning
- •Saving Money
- •Seek Help
- •People
- •Who Should I Hire?
- •Advertising
- •References
- •Interviews
- •Conduct a Structured Interview
- •Probation Period
- •Trainees
- •Trainee Funding
- •Time Is on Your Mind
- •Research Techniques
- •Program Leadership
- •Summary
- •Selected Readings
- •Introduction
- •Direct Evidence
- •Indirect Evidence
- •Burnout
- •Prevention of and Recovery from Work–Life Imbalance
- •Action Plan for Finding Balance: Personal Level
- •Action Plan for Finding Balance: Professional Level
- •Conclusion
- •References
- •Introduction
- •Time Management Strategies
- •Planning and Prioritizing
- •Delegating and Saying “No”
- •Action Plans
- •Activity Logs
- •Scheduling Protected Time
- •Eliminating Distractions
- •Buffer Time
- •Goal Setting
- •Completing Large Tasks
- •Maximizing Efficiency
- •Get Organized
- •Multitasking
- •Think Positive
- •Summary
- •References
- •Selected Readings
- •Index
60 T.S. Riall
The goal of the chapter is to address major concepts in data analysis, providing the reader a foundation for analyzing and interpreting data applicable to both basic science and outcomes/health services research. It will provide a frame- work in which surgeons can interpret the literature, evaluate and review scientific articles, and evaluate study protocols, including identification of strengths and weaknesses of the study design and analysis, as well as potential errors. This information can then be used to analyze and interpret your own data or the data of others, communicate the results clearly, and apply the results to patient care.
Sources of Error in Medical Research
All research is susceptible to invalid conclusions resulting from confounding, bias, and chance. A confounder is a vari- able that is associated with both the predictor (or indepen- dent variable) and the outcome of interest (or dependent variable). This variable or risk factor may not be evenly dis- tributed between the control and study groups, producing a spurious association between the predictor and the outcome of interest. Common confounders in epidemiological or out- comes research include gender, age, socioeconomic status, comorbidities, and health behaviors. For example, if you study the relationship between coffee drinking and pancre- atic cancer, you might find a positive association (Fig. 5.1a). However, this association may be entirely explained by smoking status, a known risk factor for pancreatic cancer. If more coffee drinkers than controls are smokers, you will identify an incorrect association between coffee drinking and pancreatic cancer if you do not control for smoking.
Bias is nonrandom, systematic error in the design or con- duct of a study. Bias is unintentional and there are many types. Bias can occur in patient selection (selection bias and membership bias), study performance (information bias), patient follow-up (nonresponder bias),and outcome determi- nation (recall bias,detection bias,and interviewer bias).These types of bias are summarized in Table 5.1. Selection bias is
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Chapter 5. Analyzing Your Data |
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Coffee drinking |
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(factor being studied) |
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Active treatment vs. |
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Survival |
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observation for lowand |
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prostate cancer |
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FIGURE 5.1 (a) Confounding. In this example, smoking acts as a con- founder. Smoking is associated with both coffee drinking (the factor being studied) and developing pancreatic cancer (outcome). If more coffee drinkers than controls are smokers, you will identify an incor- rect association between coffee drinking and pancreatic cancer if you do not control for smoking. (b) Selection bias. In this example, patient comorbidity is an unmeasured risk factor that is associated with the choice of treatment (the factor being studied). In patients with lowand intermediate-risk prostate cancer,it is difficult to com- pare active treatment versus observation because patient who are healthier are more likely to undergo active therapy and also more likely to live longer
common in observational studies, where treatment is not ran- domly allocated. Patients and their physicians select treat- ment based on a variety of measurable and unmeasurable characteristics and risk factors. For example, in patients with lowand intermediate-risk prostate cancer, it is difficult to compare active treatment versus observation because patient comorbidities are associated with the choice of treatment (Fig. 5.1b). Patients who are healthier are selected to undergo active therapy and are also more likely to live longer.
62 |
T.S. Riall |
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TABLE 5.1 Types of bias |
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Type of bias |
Description |
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Prevalence or |
Occurs when a condition is characterized by |
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incidence bias |
early fatalities |
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Selection bias |
Occurs when treatment assignments are made |
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on the basis of certain characteristics of the |
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patients such that the two groups are not |
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similar |
Membership bias |
Occurs because one or more of the |
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characteristics that cause people to belong to |
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groups are related to the outcome of interest |
Information bias |
Occurs because of misclassification of the risk |
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factor being assessed and/or misclassification |
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of the disease or other outcome itself. It is a |
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type of bias that occurs when measurement |
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of information (e.g., exposure or outcome) |
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differs among study groups |
Nonresponder |
Occurs when subjects fail to respond to |
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bias |
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a survey; responders often have different |
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characteristics than nonresponders |
Recall bias |
Occurs when patients are asked to recall |
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certain events; people in a group with an |
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adverse outcome are more likely to remember |
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certain events |
Detection bias |
Occurs when a new diagnostic technique |
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is introduced that is capable of detecting a |
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disease at an earlier stage |
Interviewer bias |
Occurs when the opinion or prejudice on the |
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part of an interviewer is displayed during the |
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interview process and affects the outcome of |
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the interview |
Chance alone may lead to invalid conclusions due to type
I and type II errors. Below we will discuss inferential statistics and hypothesis testing. The effects of bias and confounding can be minimized by good study design.Experimental designs minimize bias. Randomization minimizes selection bias and equally distributes potential confounders between exposure groups. Blinding and matching can further decrease bias.
Chapter 5. Analyzing Your Data |
63 |
Study Design
In order to understand the conclusions that can be drawn from a study, it is critical to understand the study design. In medicine, study designs fall into two broad categories: (1) observational studies in which subjects’ treatment choices are observed and their outcomes documented and (2) experi- mental studies in which researchers randomly allocate the treatment.
There are four types of observational studies: (1) case reports or case series, (2) cross-sectional studies, (3) casecontrol studies, and (4) cohort studies. Case-series studies are simple, descriptive accounts of interesting characteristics in a group of patients.Such studies do not include control patients who do not have the disease or condition being described. These studies often serve as the foundation for future casecontrol and cohort studies. For example, when introducing a new procedure such as single-incision laparoscopic cholecys- tectomy, one might want to report the outcomes of the first group of patients undergoing the procedure to demonstrate safety and feasibility. This research may then lead to casecontrol and cohort studies comparing the new procedure to the current gold standard, in this case, standard four-incision laparoscopic cholecystectomy.
Cross-sectional studies include surveys, polls, and preva- lence studies. They analyze data collected on a group of sub- jects at a single point in time. The intent of a cross-sectional study is to provide a description of what is happening at that single time point. Cross-sectional studies can provide preva- lence of a condition (the number of people with the condition divided by the total population at one point in time). Incidence, or the number of people who develop a condition over a specified period of time, cannot be ascertained in cross-sectional studies.
Case-control and cohort studies are often termed longitudi- nal studies,where subjects are followed over time.The primary difference between the two study types is the direction of the inquiry. Case-control studies are retrospective.The “cases” are
64 T.S. Riall
selected based on the presence of some disease or outcome, while “controls” are individuals without the disease or out- come. For example, you might want to study risk factors for the development of pancreatic fistula after pancreatic resec- tion. In a case-control study, the cases are patients undergoing pancreatic resection who developed a fistula, and the controls are patients undergoing pancreatic resection who did not.You then look back and compare potential risk factors such as pancreatic texture, preoperative diagnosis, anastomotic tech- nique, etc., between the cases and controls. Case-control stud- ies are efficient for unusual conditions or outcomes and are relatively easy to perform, but it can often be difficult to iden- tify an appropriate control. In addition, high-quality medical records are essential. Such studies are especially susceptible to selection and detection bias.The results of case-control studies are often presented as odds ratios (OR).
Traditional cohort studies are prospective. In prospective studies, the direction of inquiry is forward from the cohort inception, and events occur after the study begins. Retrospective cohort studies are studies in which the cohort is identified based on historical medical records, and the fol- low-up period is partly or completely in the past. Cohort studies are optimal for studying the incidence, course, and risk factors for a disease since subjects are followed over time. Using the same example above with a cohort study design, the investigator would define the cohort as patients undergoing pancreatic resection, all of whom are at risk for developing a fistula. All potential risk factors are assessed at the onset of the study (before surgery). Patients are then fol- lowed prospectively to observe the effect of the risk factors on the outcome, in this case, fistula formation. The results of a cohort study are usually presented as relative risk. Prospective cohort studies minimize selection, information, recall, and measurement bias. They often require a long time for completion and are not good for looking at rare outcomes.
In experimental studies, subjects are allocated to specific treatment groups. These studies involve the use of controls that can be concurrent, sequential (cross-over design), or