- •Foreword
- •Contents
- •Contributor Current and Past Positions: Association for Academic Surgery
- •Contributors
- •Academic Surgeons as Bridge-Tenders
- •Types of Surgical Research
- •Going Forward
- •Selected Readings
- •Introduction
- •Preparation Phase
- •Assistant Professor
- •Job Search
- •The First Three Years
- •Career Development Awards (CDAs)
- •Contemplating a Mid-Career Move?
- •Approaching Promotion
- •Associate Professor and Transition to Full Professor
- •Conclusion
- •Selected Readings
- •Introduction
- •Reviewing the Literature
- •Developing a Hypothesis
- •Study Design
- •Selected Readings
- •Introduction
- •The Dual Loyalties of the Surgeon-Scientist
- •Human Subjects Research
- •Informed Consent
- •Surgical Innovation and Surgical Research
- •Conflict of Interest
- •Publication and Authorship
- •Conclusion
- •References
- •Sources of Error in Medical Research
- •Study Design
- •Inferential Statistics
- •Types of Variables
- •Measures of Central Tendency and Spread
- •Measures of Spread
- •Comparison of Numeric Variables
- •Comparison of Categorical Values
- •Outcomes/Health Services Research
- •Steps in Outcomes Research
- •The Basics of Advanced Statistical Analysis
- •Multivariate Analysis
- •Time-to-Event Analysis
- •Advanced Methods for Controlling for Selection Bias
- •Propensity Score Analysis
- •Instrumental Variable (IV) Analysis
- •Summary
- •Selected Readings
- •Transgenic Models
- •Xenograft Models
- •Noncancer Models
- •Alternative Vertebrate Models
- •Selected Readings
- •Overview
- •Intellectual Disciplines and Research Tools
- •Comparative Effectiveness Research
- •Patient-Centered Outcomes Research
- •Data Synthesis
- •Overview
- •Intellectual Disciplines and Research Tools
- •Disparities
- •Quality Measurement
- •Implementation Science
- •Patient Safety
- •Optimizing the Health Care Delivery System
- •Overview
- •Intellectual Disciplines and Research Tools
- •Policy Evaluation
- •Surgical Workforce
- •Conclusion
- •References
- •Introduction
- •What Is Evidence-Based Medicine?
- •Evidence-Based Educational Research
- •Forums for Surgical Education Research
- •Conducting Surgical Education Research
- •Developing Good Research Questions
- •Beginning the Study Design Process
- •Developing a Research Team
- •Pilot Testing
- •Demonstrating Reliability and Validity
- •Developing a Study Design
- •Data Collection and Analysis
- •Surveys
- •Ethics
- •Funding
- •Conclusions
- •Selected Readings
- •Genomics
- •Gene-Expression Profiling
- •Proteomics
- •Metabolomics
- •Conclusions
- •References
- •Selected Readings
- •Introduction
- •Why Write
- •Getting Started
- •Where and When to Write
- •Choosing the Journal
- •Instructions to Authors
- •Writing
- •Manuscript Writing Order
- •Figures and Tables
- •Methods
- •Results
- •Figure Legends
- •Introduction
- •Discussion
- •Acknowledgments
- •Abstract
- •Title
- •Authorship
- •Revising Before Submission
- •Responding to Reviewer Comments
- •References
- •Selected Readings
- •Introduction
- •Origins of the Term
- •Modern Definition and Primer
- •Transition from Mentee to Colleague
- •Mentoring Risks
- •Conclusion
- •References
- •Selected Readings
- •The Career Development Plan
- •Choosing the Mentor
- •Writing the Career Development Plan
- •The Candidate
- •Research Plan
- •Final Finishing Points About the Research Plan
- •Summary
- •References
- •Introduction
- •Decisions, Decisions!
- •Mission Impossible: Defining a Laboratory Mission or Vision
- •Project Planning
- •Saving Money
- •Seek Help
- •People
- •Who Should I Hire?
- •Advertising
- •References
- •Interviews
- •Conduct a Structured Interview
- •Probation Period
- •Trainees
- •Trainee Funding
- •Time Is on Your Mind
- •Research Techniques
- •Program Leadership
- •Summary
- •Selected Readings
- •Introduction
- •Direct Evidence
- •Indirect Evidence
- •Burnout
- •Prevention of and Recovery from Work–Life Imbalance
- •Action Plan for Finding Balance: Personal Level
- •Action Plan for Finding Balance: Professional Level
- •Conclusion
- •References
- •Introduction
- •Time Management Strategies
- •Planning and Prioritizing
- •Delegating and Saying “No”
- •Action Plans
- •Activity Logs
- •Scheduling Protected Time
- •Eliminating Distractions
- •Buffer Time
- •Goal Setting
- •Completing Large Tasks
- •Maximizing Efficiency
- •Get Organized
- •Multitasking
- •Think Positive
- •Summary
- •References
- •Selected Readings
- •Index
144 D.P. Foley
Conclusions
Translational research is a viable and rapidly expanding field of research that allows the surgeon to identify molecular sig- natures or novel biomarkers for a given disease process that he or she manages clinically. Surgeons have the unique ability to identify the critical challenges in patient management, ask the appropriate research questions, and bring those questions to the laboratory for testing. Technologies for genomics, pro- teomics, and metabolomics are available and constantly improving so that scientists can continue to unravel the rela- tionships of molecular signatures and protein biomarkers with disease. The development of a successful translational research program requires collaboration with a group of cli- nicians and scientists with the skills to develop an effective methodological strategy. In addition, the team needs to have the technical expertise to carry out the high-throughput, bio- chemical and molecular studies and analyses that can be cor- related with clinical outcomes. The surgeon-scientist can be the leader of this collaborative team. The development of a robust translational research program is a viable and reward- ing career path that can lead to success in academic surgery.
References
1.Transforming Translation-Harnessing Discovery for Patient and Public Benefit. Report of the Translational Research Working Group of the National Cancer Advisory Board. 2007.
2.Gerber DE, Minna JD.ALK inhibition for non-small cell lung cancer: from discovery to therapy in record time. Cancer Cell. 2010;18: 548-551.
3.Tusher VG, Tibshirani R, Chu G. Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA.
2001;98:5116-5121.
4.Harring TR, Guiteau JJ, Nguyen NT, et al. Building a comprehensive genomic program for hepatocellular carcinoma. World J Surg. 2011;
35(8):1746-50
Chapter 9. Translational Research and New Approaches 145
5.Dowell JA, Frost DC, Zhang J, Li L. Comparison of two-dimensional fractionation techniques for shotgun proteomics. Anal Chem.
2008;80:6715-6723.
6.Nelson PR, O’Malley KA, Feezor RJ, et al. Genomic and proteomic determinants of lower extremity revascularization failure: rationale and study design. J Vasc Surg. 2007;45(suppl A):A82-A91.
7.Tweedle EM, Khattak I, Ang CW, et al. Low molecular weight heat shock protein HSP27 is a prognostic indicator in rectal cancer but not colon cancer. Gut. 2010;59:1501-1510.
8.Ren F, Wu H, Lei Y, et al. Quantitative proteomics identification of phosphoglycerate mutase 1 as a novel therapeutic target in hepatocellular carcinoma. Mol Cancer. 2010;9:81.
Selected Readings
Beger RD, Sun J, Schnackenberg LK. Metabolomics approaches for discovering biomarkers of drug-induecd hepatotoxicity and nephro- toxicity. Toxicol Appl Pharm. 2010;243:154-166.
Cobb JP, Mindrinos MN, Miller-Graziano C, et al. Application of genome-wide expression analysis to human health and disease. PNAS. 2005;102(13):4801-4806.
Hirschhorn JN, Lohmueller K, Byrne E, et al. A comprehensive review of genetic association studies. Genet Med. 2002;4(2):45-61.
Hocquette JF. Where are we in genomics? J Physiol Pharmacol. 2005;56(Supp 3):37-70.
McDunn JE, Chung P, Laramie JM, et al. Surgical research review: physiologic genomics. Surgery. 2006;139(2):133-139.
Chapter 10
How to Write and Revise
a Manuscript for Peer-Review Publication
Melina R. Kibbe
Keywords Manuscript • Revision • Writing • Organization
Introduction
Writing is often regarded as an unfavorable or difficult task, and is frequently left to the last minute out of dislike, lack of confidence, or lack of know-how. However, writing can be fun, and the fruits of your labor can have substantial benefits. The purpose of this chapter is to convey to the reader why it is important to write, especially in academia, and why it is important to learn how to write and revise manuscripts well. Specifically, this chapter will address how to get started writing, including where and when to write and how to choose the appropriate journal, how to write a manuscript for peerreview publication, the order in which to write the manuscript sections, and provide detailed suggestions for how to write each section. This chapter will also address the importance of
M.R. Kibbe
Division of Vascular Surgery, Northwestern University Feinberg School
of Medicine, Chicago, IL, USA
H. Chen and L.S. Kao (eds.), Success in Academic Surgery, |
147 |
DOI 10.1007/978-0-85729-313-8_10,
© Springer-Verlag London Limited 2012